Department of Biochemistry and Molecular Biology

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Department of Biochemistry and Molecular Biology has more than 6 academic staff members

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Prof.Dr. Abdulla Masood Bashein Bashein

عبدالله بشين هو احد اعضاء هيئة التدريس بقسم الكيمياء الحيوية بكلية الطب البشري. يعمل السيد عبدالله بشين بجامعة طرابلس كـأستاذ منذ 2007-04-15 وله العديد من المنشورات العلمية في مجال تخصصه

Publications

Some of publications in Department of Biochemistry and Molecular Biology

A comparative evaluation of two DNA extraction protocols from whole blood sample

Every organism has deoxyribonucleic acid (DNA) within their cells. DNA is a complex molecule that contains all of the information needed to build and maintain living organisms. Extraction of deoxyribonucleic acid (DNA) is one of the most basic and critical steps affecting molecular-based techniques in the study of DNA that allow vast advances in genetic, molecular biology, biotechnology, forensic, and bioinformatics laboratories. Therefore, researchers have been used different modified and optimized protocols for efficient genomic DNA extraction from biological samples. Due to the high amount of genetic material in whole blood samples so it's one of the main sources used to obtain DNA and there are many different protocols available in this issue. In the present study, we optimized, evaluated by comparison to phenol-chloroform (traditional method) and silica column (QIAamp DNA Blood Mini Kit) DNA extraction procedures. The extracted DNA by these protocols was analyzed according to their time consuming, quality, quantity, cost and toxicity. Extracted DNA with current protocol was qualified using gel electrophoresis, Nanodrop spectrophotometric analysis. Our results showed that there are not significantly differences between these methods about DNA Purity (A260/A280) and DNA yield (ng DNA/μl). In addition, phenol/chloroform (traditional method) was the most toxic method; it takes more time but cheaper than other method; it yielded reasonably good quantities of good quality DNA and would be suitable for large-scale genotyping of blood samples. The silica column method (QIAamp DNA Blood Mini Kit) was the most expensive among the other method but the least extraction time was required and it was the safest method. arabic 11 English 69
Ghada Salem, Ahmed Zaid(1-2018)
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Seroprevalence of Pertussis in School-entry Age Children in Libya, A Cross-sectional Study

Objective: In Libya, no pertussis booster doses are administered to children after 18 months of age. In light of evidence of waning of vaccine-induced immunity to pertussis, this study aimed to evaluate the waning of immunity in vaccinated school-entry age children, as measured by susceptibility to infection at population level. For this purpose, IgG and IgA levels were measured as markers of recent (infection in the last 6 months) and non-recent infections (infection in the last 12 months). Material and Methods: This was a cross sectional study undertaken in Tripoli, in February 2015. Children of school-entry age (> 5 to ≤ 7 years) were recruited on convenience basis at vaccination centers. Sera were tested for antibodies to pertussis. Results: Samples from791 children (421 males and 370 females, mean age 6.50 were tested). All of the participants had received 4 doses of Whole cell pertussis containing vaccine in the first 2 years of life. The prevalence of recent and non-recent pertussis infection were 4.8% and 2.5%, respectively. The proportion of children with undetectable level of IgG was 76.1%. Conclusion: The findings of this study showed significant circulation of Bordetella pertussis among vaccinated children by school-entry age. The circulation of B. pertussis in this population may be an indirect sign of waned immunity, which is simply corroborated by the absence of detectable antibodies in 76.1% of the children. arabic 14 English 76
Suleiman Abusrewil, Abdulla Bashein(1-2019)
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IS T228A POLYMORPHISM INSORBS1GENE ASSOCIATED WITH T2DM, GESTATIONAL DIABETES OR OBESITY IN LIBYAN PREGNANT WOMEN

GLUT4 translocation in response to insulin involves the PI3K/Akt pathway and IR mediated phosphorylation of CAP (SORBS1), and formation of the CAP:Cbl. These pathways act in a coordinated manner to regulate glucose, lipid and protein metabolism. In previous studies, T228A polymorphism of SORBS1 gene has been shown to be a protective factor for obesity, type-2 diabetes mellitus (T2DM), polycystic ovary (PCOs), and lacunars infarction. Objectives: The objective of this study was to investigate the association between this polymorphism and T2DM, gestational diabetes (GDM), and obesity. Methods: Genotyping was achieved by PCR-RELP in 227 individuals chosen randomly from the out patient’s clinics of Al-Jala maternity hospital of Tripoli and Gharian hospital, including: 63 T2DM patients, 59 GDM patients, 57 obese, 47 healthy control individuals from Libyan pregnant women population (North-West Region). Results: The results revealed that this polymorphism has no association with T2DM, GDM, and obesity in comparison with the control sample. Conclusion: T228A polymorphism of SORBS1 gene is not associated with the pathological conditions studied. arabic 15 English 98
Abdulla Bashein(1-2013)
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